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Jalapeno Bacon Mac and Cheese

Jalapeno Bacon Mac and Cheese has all the flavors of your favorite jalapeno poppers but in a creamy, cheesy pasta. Spicy jalapenos, smoky bacon, and crunchy breadcrumbs take regular macaroni and cheese to the next level!

Macaroni and cheese might just be the ultimate side dish. Whether it’s an easy stove top mac and cheese, baked macaroni and cheese, or an Instant Pot mac and cheese, the varieties are endless.

This jalapeno bacon mac and cheese, or jalapeno popper mac and cheese as I like to call it, starts with a creamy cheese sauce. Then toss in some diced jalapenos, crumbled bacon, and you’ve got an amazing side dish full of flavor.

Top down view of bacon jalapeno macaroni and cheese.

How to make jalapeno bacon mac and cheese:

Bring a large pot of salted water to a boil, and cook the noodles. We chose cavatappi noodles, but any thick, tube-shaped noodles will work.

While the noodles cook, toast the breadcrumbs. The breadcrumb topping is optional, but it adds a nice crunch to the mac and cheese.

Melt the butter in a small pan over low heat, then add the Panko breadcrumbs. Stir continuously to ensure the breadcrumbs don’t burn.

Collage style photo showing how to make paprika breadcrumbs.
Panko breadcrumb topping is optional, but it adds a nice crunch!

After the breadcrumbs toast, pour them into a bowl, and add the grated Parmesan cheese, and smoked paprika. Stir to combine, and set the breadcrumbs aside.

In a medium skillet with tall sides, melt the butter for cheese sauce over low to medium heat. Add the flour, and whisk to combine.

Continue to whisk, until the flour is completely incorporated with the butter and the mixture (roux) turns light and golden in color. While continuing to whisk, slowly pour in the heavy cream, milk, salt and pepper.

Collage style photo of how to make a roux.
Making a cheese isn’t difficult, just don’t let the roux separate.

Continue whisking until the mixture begins to thicken slightly and steep. You’ll be able to see wisps of steam rise from the liquid.

Drop small amounts of the shredded cheese into the hot liquid, and whisk until the cheese is completely melted. Add a little more cheese, and whisk again.

Continue this process until all the cheese has been added. It’s important not to add all the cheese at once, because it will lower the temperature of the milk and heavy cream causing the cheese not to melt properly.

Once all the cheese is added, whisk in the jalapenos and crumbled (cooked) bacon. Remove the cheese sauce from heat.

Collage style photo of how to make a jalapeno cheese sauce.
Stir in the jalapenos and bacon last, then add the sauce to the cooked noodles.

If you haven’t already, drain the pasta noodles. Pour the cheese sauce over the noodles, and stir to combine.

Divide into individual serving bowls, and top with toasted breadcrumbs. Another option is to pour into a large serving dish and spread all the breadcrumbs, extra crumbled bacon, and sliced jalapenos over the top.

Enjoy hot, and store leftovers in the refrigerator for up to 3 days.

Close up view of macaroni and cheese with sliced jalapenos.
Top the mac and cheese toasted breadcrumbs and sliced jalapenos.

Is jalapeno bacon mac and cheese baked?

Our recipe is not baked, but you can bake it with a couple minor changes.

1. Cook the pasta to al dente.
2. Don’t toast the breadcrumbs ahead of time. Mix the breadcrumbs with the melted butter, Parmesan cheese, and paprika, but don’t toast them.
3. Save about 1/4 cup of pasta water to mix with the pasta and cheese sauce to keep it from drying out in the oven.
4. Bake in a 9 x 13-inch baking dish on 350°F for about 20-30 minutes.
5. Here is a similar Jalapeno Popper Mac and Cheese recipe that is baked. It has different ingredients, and looks amazing!

Can you use a different type of cheese than the ones listed?

Yes, absolutely! Use your favorite variety of cheese. We like the flavor of cheddar, Monterrey jack, and pepper jack, but switch things up if you’d like. White cheddar, gouda, or smoked cheddar would taste great with this mac and cheese.

Can you freeze macaroni and cheese?

We haven’t tried to freeze this macaroni and cheese recipe. However, according to the author of this Jalapeno Popper Mac and Cheese recipe, it can be frozen for up to 3 months in a sealed container.

What’s the best way to reheat jalapeno bacon mac and cheese?

We recommend heating it on the stove over low heat. If the mac and cheese appears dry, add a tablespoon or two of milk or heavy cream.

It can also be reheated in the microwave on half power and stirred every 30 seconds.
Yield: About 10 Cups

Jalapeno Bacon Mac and Cheese

Top down view of bacon jalapeno macaroni and cheese.

Jalapeno Bacon Mac and Cheese has all the flavors of your favorite jalapeno poppers but in a creamy, cheesy pasta. Spicy jalapenos, smoky bacon, and crunchy breadcrumbs take regular macaroni and cheese to the next level!

Prep Time 10 minutes
Cook Time 20 minutes
Total Time 30 minutes


Optional Breadcrumb Topping:

  • 1 Cup Panko Breadcrumbs
  • 2 Tablespoons Unsalted Butter, melted
  • ¼ Cup Parmesan Cheese, grated
  • ¼ Teaspoon Smoked Paprika

Macaroni and Cheese:

  • 16 Ounces Cavatappi Noodles (or other thick, tube-shaped noodles)
  • 4 Tablespoons Unsalted Butter
  • 4 Tablespoons All-Purpose Flour
  • 2 Cups Whole Milk
  • 1 Cup Heavy Cream
  • 1/2 Teaspoon Salt
  • 1/2 Teaspoon Pepper
  • 4 Ounces Cheddar Cheese, shredded
  • 4 Ounces Monterey Jack Cheese, shredded
  • 4 Ounces Pepper Jack Cheese, shredded
  • 1 Large Jalapeno, seeded, membranes removed, and diced
  • 6 Ounces Bacon, cooked and crumbled


To Make the Breadcrumb Topping:

  1. Please see information in the post/article for answers to frequently asked questions.
  2. Place the butter and breadcrumbs in a small skillet over low heat. Cook until the breadcrumbs become lightly browned and crunchy.
  3. Remove to a waiting bowl, and stir in the cheese and smoked paprika. Set aside.

To Make the Macaroni and Cheese:

  1. Cook the noodles according to the package directions, drain, rinse in cool water, and set aside. 
  2. While the noodles cook, make the cheese sauce. Heat a large pan over low-medium heat. Once the pan is hot, add the butter and allow it to melt completely. Next, add whisk in the flour, salt, and pepper. Continue to whisk continuously for 2-3 minutes.
  3. Slowly add the milk and heavy cream while whisking to combine. Allow the mixture to thicken, and continue to whisk until the liquid begins to steep and steam. Don’t let the liquid begin to boil.
  4. Add the cheese a little at a time while whisking. Don’t add additional cheese to the pan until the last cheese has completely melted. After all the cheese has been added, whisk in the diced jalapenos and crumbled bacon. Turn off the heat and add the cooked noodles.
  5. Top with panko breadcrumbs, extra cooked bacon, and more sliced jalapenos.
  6. Serve hot, and store any leftovers in the refrigerator for up to 3 days.


*The calories listed are an approximation based on the ingredients in the recipe card and a serving size of ½ cup of macaroni and cheese. Actual calories will vary.

*For more information, tips, and answers to frequently asked questions, please refer to the post.

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Nutrition Information:



Serving Size:

.5 Cup

Amount Per Serving: Calories: 259Total Fat: 18gSaturated Fat: 10gTrans Fat: 0gUnsaturated Fat: 7gCholesterol: 50mgSodium: 378mgCarbohydrates: 14gFiber: 1gSugar: 2gProtein: 11g

*The calories are an estimate and are based on the ingredients and serving size listed. The calories can vary depending on the brand of product purchased.

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Sunday 8th of August 2021

Great recipe, add a little hot sauce to to roux and use 8 oz velvetta cheese use the panko mixture and sprinkle on top and bake until bubbly at 350 degrees .with or without bacon and jalapeños is great too

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